STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8LBV2_THAPSSulfate transporter. (526 aa)    
Predicted Functional Partners:
Lhcr9
Fucoxanthin chl a/c light-harvesting protein.
   
   0.652
B8BUM3_THAPS
Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.642
THAPS_35409
Cytochrome C peroxidase; Belongs to the peroxidase family.
      
 0.592
B8CBC5_THAPS
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
      
 0.592
B8C9V4_THAPS
Bisphosphate nucleotidase.
      
 0.591
URE
Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
      
 0.590
B8CF21_THAPS
Catalase-peroxidase.
   
 
 0.588
PsbO
Oxygen-evolving enhancer protein 1.
    
 
 0.565
psbK
Photosystem II reaction center protein K; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
    
   0.534
psbD
Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex.
    
   0.534
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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