STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAPSDRAFT_780UDP galactopyranose mutase. (400 aa)    
Predicted Functional Partners:
GALE1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.927
GALE2
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.927
B8C430_THAPS
Uncharacterized protein.
    
  0.900
B8CC52_THAPS
Uncharacterized protein.
  
 
  0.900
UGDH2
UDP-glucose 6-dehydrogenase.
  
  
 0.813
UGDH1
UDP-glucose 6-dehydrogenase.
  
  
 0.813
B8C3A1_THAPS
RmlD_sub_bind domain-containing protein.
  
  
 0.793
DGD3
Dtdp-glucose 4,6-dehydratase.
  
  
 0.793
B8C5I0_THAPS
Epimerase domain-containing protein.
  
 
 0.641
THAPSDRAFT_181
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein.
  
  
 0.626
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.