STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8LCM7_THAPSExonuclease 1. (334 aa)    
Predicted Functional Partners:
B8LEH2_THAPS
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.991
B8LC23_THAPS
Predicted protein.
  
 0.943
B8C801_THAPS
Mlh1-like protein.
   
 0.928
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.926
B8C3H0_THAPS
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
  
 0.914
B8C060_THAPS
Uncharacterized protein.
   
 
 
0.900
B8CFF0_THAPS
Uncharacterized protein.
   
 0.879
B8CE54_THAPS
AAA_12 domain-containing protein.
   
 0.858
B8C8E2_THAPS
UmuC domain-containing protein.
  
 0.851
B8BYC0_THAPS
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
 0.849
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
Server load: low (26%) [HD]