STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8LCU2_THAPSPredicted protein. (213 aa)    
Predicted Functional Partners:
B8BYE2_THAPS
Uncharacterized protein.
    
 0.908
B8C7G9_THAPS
Uncharacterized protein.
    
 0.733
B8BV51_THAPS
B30.2/SPRY domain-containing protein.
    
 0.728
B8C758_THAPS
ANK_REP_REGION domain-containing protein.
   
 0.689
B8C5P5_THAPS
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.653
B8C530_THAPS
Uncharacterized protein.
    
 0.632
TUB2
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.617
B8BT32_THAPS
Uncharacterized protein.
    
 0.615
TUB3
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.614
B8CC21_THAPS
PI3K/PI4K domain-containing protein.
   
 0.614
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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