STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8LEL5_THAPSUncharacterized protein. (417 aa)    
Predicted Functional Partners:
DPS1
Dihydropteroate synthetase.
 
 
 0.995
TMS1
Possible thymidylate synthase.
     
 0.957
FGS1
Folylpolyglutamate synthase.
  
  
 
0.917
B8BY90_THAPS
Formate-tetrahydrofolate ligase.
  
 
 0.767
B8C1C5_THAPS
Polyribonucleotide nucleotidyltransferase.
     
 0.727
B8C097_THAPS
AA_TRNA_LIGASE_II domain-containing protein.
   
  
 0.715
B8C1D1_THAPS
Asparaginyl-trna synthetase.
   
  
 0.715
TKT1
Transketolase.
  
  
 0.708
TKT2
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
  
 0.708
B8C3Y5_THAPS
Component II, glutamine amidotransferase.
     
 0.689
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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