STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8LET6_THAPSATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (474 aa)    
Predicted Functional Partners:
atpI
ATP synthase subunit a, chloroplastic; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
  
 0.983
B8C0W4_THAPS
ATP synthase.
 
 0.979
B8C1R6_THAPS
Uncharacterized protein.
 
 0.977
atpE
ATP synthase epsilon chain, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.973
THAPS_19298
F-type H-ATPase delta subunit.
  
 0.966
atpA-2
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
0.957
atpA-3
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
0.956
atpA
ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
 
0.948
B8C8L2_THAPS
Synthase of ATP synthase.
  
 0.948
atpD-2
Plastid thylakoid ATPase delta chain, plastid protein.
  
 0.948
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
Server load: low (26%) [HD]