STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_0097PFAM: beta-lactamase; KEGG: hch:HCH_00055 beta-lactamase class C and other penicillin binding protein. (428 aa)    
Predicted Functional Partners:
Maqu_2195
PFAM: Glutathione S-transferase, N-terminal domain; KEGG: aci:ACIAD1392 hypothetical protein.
  
     0.733
Maqu_0600
PFAM: cytochrome P450; KEGG: abo:ABO_2288 cytochrome P450.
  
     0.716
Maqu_0168
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: abo:ABO_2742 acyltransferase.
  
   
 0.698
Maqu_3067
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: abo:ABO_1804 acyltransferase.
  
   
 0.681
Maqu_2152
KEGG: bpm:BURPS1710b_A1412 hypothetical protein.
 
     0.678
Maqu_1588
PFAM: Patatin; KEGG: hch:HCH_02651 predicted esterase of the alpha-beta hydrolase superfamily.
  
     0.625
Maqu_3051
KEGG: hch:HCH_01527 hypothetical protein.
  
     0.600
Maqu_1524
KEGG: abo:ABO_0977 hypothetical protein.
  
     0.585
Maqu_2091
KEGG: hch:HCH_06800 predicted metal-dependent hydrolase.
  
     0.585
Maqu_2960
KEGG: abo:ABO_0143 hypothetical protein.
  
     0.582
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.