STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (373 aa)    
Predicted Functional Partners:
Maqu_0342
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pcr:Pcryo_0238 binding-protein-dependent transport systems inner membrane component.
 0.997
Maqu_0343
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pcr:Pcryo_0237 binding-protein-dependent transport systems inner membrane component.
 
 0.997
Maqu_0344
Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.997
Maqu_0347
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_01473 ABC-type spermidine/putrescine transport system, permease component I.
 0.988
Maqu_0345
PFAM: extracellular solute-binding protein, family 1; KEGG: hch:HCH_01471 spermidine/putrescine-binding periplasmic protein.
 
 
 0.986
Maqu_0348
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3889 binding-protein-dependent transport systems inner membrane component.
 
 
 0.984
Maqu_0346
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sit:TM1040_3636 ABC transporter related; Belongs to the ABC transporter superfamily.
 
  
 
0.950
Maqu_0452
KEGG: csa:Csal_1870 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.906
Maqu_2187
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_0115 ABC transporter, transmembrane region.
 
     
0.899
Maqu_2137
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sdn:Sden_3029 binding-protein-dependent transport systems inner membrane component.
 
 0.890
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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