STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsbBDisulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. (168 aa)    
Predicted Functional Partners:
Maqu_2275
Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
 
 
 0.687
Maqu_3568
PFAM: DSBA oxidoreductase; KEGG: noc:Noc_0551 DsbA oxidoreductase.
 
  
 0.664
Maqu_0467
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
       0.595
Maqu_0469
PFAM: regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ; KEGG: hch:HCH_06417 regulator of sigma D; Belongs to the Rsd/AlgQ family.
       0.575
Maqu_0485
PFAM: protein of unknown function DUF513, hemX; KEGG: hch:HCH_00289 uncharacterized enzyme of heme biosynthesis.
 
     0.558
Maqu_1397
Transcriptional regulator, Fis family; KEGG: pen:PSEEN1816 disulfide isomerase, thiol-disulphide oxidase, periplasmic.
  
 
 0.512
Maqu_2035
Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.493
Maqu_3013
PFAM: DSBA oxidoreductase; KEGG: ade:Adeh_4049 DsbA oxidoreductase.
  
 
 0.478
Maqu_3277
PFAM: DSBA oxidoreductase; KEGG: net:Neut_0081 DsbA oxidoreductase.
  
 
 0.478
Maqu_1129
KEGG: hch:HCH_04454 hypothetical protein.
 
     0.458
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.