STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_0510PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: hch:HCH_00322 NADPH:quinone reductase and related Zn-dependent oxidoreductase. (326 aa)    
Predicted Functional Partners:
Maqu_1865
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.901
Maqu_1868
[Acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: pfo:Pfl_4158 malonyl CoA-acyl carrier protein transacylase.
 
    
 0.600
Maqu_0508
Gluconolactonase; PFAM: NHL repeat containing protein; Strictosidine synthase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: pau:PA14_47490 putative enzyme.
  
    0.563
Maqu_0509
PFAM: thioesterase superfamily protein; KEGG: hch:HCH_00150 predicted thioesterase.
       0.553
Maqu_0507
PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: hch:HCH_06647 predicted hydrolase or acyltransferase (alpha/beta hydrolase superfamily).
 
   0.494
Maqu_3822
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: abo:ABO_2039 oxidoreductase, FMN-binding.
  
 0.483
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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