STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_0749KEGG: hch:HCH_06157 hypothetical protein. (308 aa)    
Predicted Functional Partners:
Maqu_0750
PFAM: Fimbrial assembly family protein; KEGG: vch:VC0399 MSHA biogenesis protein MshI.
 
 0.998
Maqu_0753
TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; Secretin domain protein; Secretin/TonB, short N-terminal domain; KEGG: hch:HCH_06153 type II secretory pathway, component PulD.
 
  
 0.956
Maqu_0751
KEGG: pca:Pcar_0383 hypothetical protein.
 
     0.953
Maqu_0759
KEGG: vfi:VF1637 hypothetical protein.
 
  
 0.915
Maqu_0757
PFAM: type II secretion system protein; KEGG: hch:HCH_06148 type II secretory pathway, component PulF.
 
 
 
 0.904
Maqu_0756
PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: hch:HCH_06149 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 
 
 0.900
Maqu_0760
KEGG: hch:HCH_06146 type II secretory pathway, pseudopilin PulG.
 
  
 0.900
Maqu_0754
SMART: AAA ATPase; KEGG: hch:HCH_06152 type II secretory pathway, component ExeA (predicted ATPase).
 
    0.896
Maqu_0762
KEGG: hch:HCH_06143 hypothetical protein.
 
  
 0.874
Maqu_0763
KEGG: hch:HCH_06142 hypothetical protein.
 
  
 0.873
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.