STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_0867TIGRFAM: type IV pilus modification protein PilV; KEGG: noc:Noc_2271 type IV fimbrial biogenesis protein PilV. (177 aa)    
Predicted Functional Partners:
Maqu_0868
KEGG: pca:Pcar_2157 type IV pilus assembly protein PilW.
 
  
 0.992
Maqu_0871
KEGG: pat:Patl_3171 Tfp pilus assembly protein tip-associated adhesin PilY1-like.
 
  
 0.977
Maqu_0869
KEGG: xfa:XF0031 PilX protein.
 
  
 0.974
Maqu_0866
KEGG: pca:Pcar_2159 putative type-4 fimbrial pilin related signal peptide protein.
 
  
 0.959
Maqu_0872
KEGG: noc:Noc_2275 general secretion pathway protein H.
 
   
 0.930
Maqu_0828
PFAM: Pilus assembly protein, PilO; KEGG: pae:PA5042 type 4 fimbrial biogenesis protein PilO.
 
   
 0.835
Maqu_0873
KEGG: hch:HCH_10022 Tfp pilus assembly protein FimT.
 
  
 0.821
Maqu_0829
PFAM: Pilus assembly protein, PilQ; KEGG: hch:HCH_10024 Tfp pilus assembly protein PilP.
  
  
 0.810
Maqu_0827
PFAM: Fimbrial assembly family protein; KEGG: hch:HCH_05971 Tfp pilus assembly protein PilN.
 
   
 0.806
Maqu_0830
TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain; KEGG: hch:HCH_05969 type 4 fimbrial biogenesis protein PilQ.
 
   
 0.805
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.