STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_0897PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: hch:HCH_04305 FOG: CheY-like receiver. (546 aa)    
Predicted Functional Partners:
Maqu_0896
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: hch:HCH_04306 signal transduction histidine kinase.
 
   
 0.952
Maqu_0898
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: hch:HCH_05072 Na+/proline symporter.
  
 
 0.924
Maqu_1992
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: hch:HCH_05187 protein containing STAS (sulphate transporter and AntiSigma factor antagonist) domain.
 
    0.847
Maqu_1176
Putative CheW protein; PFAM: response regulator receiver; CheW domain protein; KEGG: hch:HCH_04719 chemotaxis signal transduction protein.
 
  
 0.813
Maqu_1987
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
    0.770
Maqu_1973
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
     0.762
Maqu_1997
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.761
Maqu_1991
PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: hch:HCH_05185 response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
 0.754
Maqu_1995
PFAM: flagellar assembly protein FliH; KEGG: hch:HCH_05191 putative flagellar assembly protein.
 
    0.754
Maqu_1986
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
    0.731
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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