Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Maqu_0978 | Maqu_0979 | PFAM: phage integrase family protein; KEGG: son:SO2528 site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family. | PFAM: putative transposase; KEGG: son:SO2212 transposase, IS91 family, putative. | 0.983 |
Maqu_0978 | Maqu_0980 | PFAM: phage integrase family protein; KEGG: son:SO2528 site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.404 |
Maqu_0979 | Maqu_0978 | PFAM: putative transposase; KEGG: son:SO2212 transposase, IS91 family, putative. | PFAM: phage integrase family protein; KEGG: son:SO2528 site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family. | 0.983 |
Maqu_0979 | Maqu_0980 | PFAM: putative transposase; KEGG: son:SO2212 transposase, IS91 family, putative. | Hypothetical protein. | 0.404 |
Maqu_0979 | Maqu_3208 | PFAM: putative transposase; KEGG: son:SO2212 transposase, IS91 family, putative. | PFAM: phage integrase family protein; KEGG: bps:BPSL0587 phage integrase family protein. | 0.502 |
Maqu_0979 | Maqu_3237 | PFAM: putative transposase; KEGG: son:SO2212 transposase, IS91 family, putative. | Retron-type reverse transcriptase-like protein; KEGG: eba:ebA4939 reverse transcriptase/maturase. | 0.424 |
Maqu_0980 | Maqu_0978 | Hypothetical protein. | PFAM: phage integrase family protein; KEGG: son:SO2528 site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family. | 0.404 |
Maqu_0980 | Maqu_0979 | Hypothetical protein. | PFAM: putative transposase; KEGG: son:SO2212 transposase, IS91 family, putative. | 0.404 |
Maqu_3208 | Maqu_0979 | PFAM: phage integrase family protein; KEGG: bps:BPSL0587 phage integrase family protein. | PFAM: putative transposase; KEGG: son:SO2212 transposase, IS91 family, putative. | 0.502 |
Maqu_3237 | Maqu_0979 | Retron-type reverse transcriptase-like protein; KEGG: eba:ebA4939 reverse transcriptase/maturase. | PFAM: putative transposase; KEGG: son:SO2212 transposase, IS91 family, putative. | 0.424 |