STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_1098PFAM: ABC-2 type transporter; KEGG: abo:ABO_0879 ABC transporter permease component. (257 aa)    
Predicted Functional Partners:
Maqu_1097
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_04491 ABC-type multidrug transport system, ATPase component.
  
 0.968
Maqu_1452
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: abo:ABO_0297 ABC transporter, ATP-binding protein, putative.
  
 0.864
queF
GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
     
 0.774
Maqu_0018
PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: dar:Daro_0987 ABC-2:ABC transporter related.
  
 
 0.594
Maqu_2174
TIGRFAM: uncharacterized domain; PFAM: OsmC family protein; protein of unknown function DUF181; KEGG: ilo:IL2181 multidomain protein containing OsmC-like N-terminal domain and uncharacterized conserved domain.
  
  
 0.528
Maqu_1197
PFAM: protein of unknown function DUF140; KEGG: pfl:PFL_0100 ABC transporter, permease protein, putative.
    
  0.460
Maqu_1096
Hypothetical protein; KEGG: hch:HCH_04492 ABC-type transport system involved in resistance to organic solvents, permease component.
       0.455
Maqu_1101
PFAM: nitroreductase; KEGG: pau:PA14_22710 putative nitroreductase family protein.
  
    0.438
Maqu_1453
PFAM: ABC-2 type transporter; KEGG: abo:ABO_0298 ATP-binding cassette (ABC) transporters, permease, putative.
  
  
 
0.437
Maqu_2167
PFAM: Abortive infection protein; KEGG: aeh:Mlg_2598 abortive infection protein.
  
  
 0.426
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.