STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_1390KEGG: hch:HCH_03039 hypothetical protein. (158 aa)    
Predicted Functional Partners:
Maqu_1391
PFAM: cytochrome c, class I; KEGG: rsp:RSP_3264 probable C-type cytochrome.
  
 
 0.737
Maqu_1392
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: noc:Noc_2758 mercuric reductase MerA.
       0.620
Maqu_1784
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase, subunit I; KEGG: hch:HCH_02276 cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.620
Maqu_1785
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase, mono-heme subunit/FixO; KEGG: hch:HCH_02275 cytochrome c oxidase, cbb3-type, subunit II.
  
 
 0.593
Maqu_1389
KEGG: net:Neut_0054 cytochrome c biogenesis protein, transmembrane region.
       0.515
merP-2
Mercuric transport protein periplasmic component; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT.
       0.448
Maqu_1394
PFAM: Mercuric transport protein MerT; KEGG: rme:Rmet_2313 mercuric transport protein MerT.
       0.435
Maqu_1786
PFAM: Cbb3-type cytochrome oxidase component; KEGG: hch:HCH_02274 cytochrome c oxidase, cbb3-type, subunit CcoQ.
  
  
 0.418
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.