STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_1399Hypothetical protein. (196 aa)    
Predicted Functional Partners:
Maqu_1398
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: dvu:DVU0999 ThiO:disulfide interchange protein, putative.
       0.735
Maqu_1397
Transcriptional regulator, Fis family; KEGG: pen:PSEEN1816 disulfide isomerase, thiol-disulphide oxidase, periplasmic.
       0.729
Maqu_0765
Hypothetical protein; KEGG: she:Shewmr4_3473 MSHA biogenesis protein MshQ.
    
 
 0.665
Maqu_0821
PFAM: Ig domain protein, group 1 domain protein; KEGG: pat:Patl_2358 Ig-like, group 1.
    
 
 0.665
Maqu_0944
KEGG: hch:HCH_01904 hypothetical protein.
    
 
 0.665
Maqu_1377
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sma:SAV4404 hypothetical protein.
    
 
 0.665
Maqu_2796
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: hch:HCH_05735 subtilisin-like serine protease; Belongs to the peptidase S8 family.
    
 
 0.665
Maqu_2875
KEGG: hch:HCH_02113 hypothetical protein.
    
 
 0.665
Maqu_1400
PFAM: electron transport protein SCO1/SenC; Redoxin domain protein; KEGG: eba:ebA2886 predicted uncharacterized protein SCO1/SenC/PrrC,involved in biogenesis of respiratory and photosynthetic systems.
       0.615
Maqu_1401
PFAM: Redoxin domain protein; KEGG: pol:Bpro_3502 hypothetical protein.
       0.485
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.