STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_1522DsrC family protein; Part of a sulfur-relay system. (108 aa)    
Predicted Functional Partners:
Maqu_1519
PFAM: DsrE family protein; KEGG: hch:HCH_02548 uncharacterized conserved protein involved in intracellular sulfur reduction.
 
 
 0.996
Maqu_1521
KEGG: vpa:VP2774 putative uncharacterized protein involved in oxidation of intracellular sulfur.
 
 
 0.967
Maqu_1520
PFAM: DsrE family protein; KEGG: csa:Csal_1924 DsrE-like protein.
 
  
 0.949
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
   
 0.933
Maqu_1518
PFAM: protein of unknown function UPF0005; KEGG: pen:PSEEN2225 hypothetical protein; Belongs to the BI1 family.
     
 0.603
Maqu_3083
TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: abo:ABO_0543 respiratory nitrate reductase 1 gamma chain.
     
 0.436
thiI
[ThiS-adenylate] sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
      
 0.424
Maqu_1871
PFAM: protein of unknown function DUF177; KEGG: csa:Csal_1597 protein of unknown function DUF177.
  
     0.419
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.