STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_1570PFAM: Patatin; KEGG: hch:HCH_02419 predicted esterase of the alpha-beta hydrolase superfamily. (360 aa)    
Predicted Functional Partners:
prmB
[LSU ribosomal protein L3P]-glutamine N5-methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
       0.577
Maqu_1571
KEGG: hch:HCH_02418 hypothetical protein.
     
 0.543
Maqu_1572
Epoxide hydrolase, Serine peptidase, MEROPS family S33; PFAM: alpha/beta hydrolase fold; KEGG: hch:HCH_02417 predicted hydrolase or acyltransferase (alpha/beta hydrolase superfamily).
       0.504
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.495
Maqu_1573
PFAM: type IV pilus assembly PilZ; KEGG: hch:HCH_02415 Tfp pilus assembly protein PilZ.
       0.484
Maqu_1575
PFAM: transglutaminase domain protein; KEGG: hch:HCH_02669 transglutaminase-like enzyme, putative cysteine protease.
       0.420
Maqu_1576
PFAM: protein of unknown function DUF58; KEGG: pae:PA2874 hypothetical protein.
       0.420
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.