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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_16632-methylaconitate cis-trans isomerase; TIGRFAM: putative AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: reu:Reut_A1811 protein of unknown function DUF453. (392 aa)    
Predicted Functional Partners:
Maqu_1664
2-methylcitrate dehydratase (trans-methylaconitate-forming); Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
 
 
 0.996
Maqu_1662
KEGG: csa:Csal_2419 2-methylcitrate dehydratase PrpD; TIGRFAM: 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein.
  
 
  0.982
Maqu_1859
Aconitase; PFAM: aconitate hydratase domain protein; aconitate hydratase 2; KEGG: sde:Sde_1893 transcriptional regulator, XRE family; Belongs to the aconitase/IPM isomerase family.
    
 0.914
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
 
  
 0.897
Maqu_1665
KEGG: hch:HCH_02711 citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; Belongs to the citrate synthase family.
 
  
 0.850
Maqu_1667
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: hch:HCH_02709 transcriptional regulator.
 
  
 0.756
Maqu_3674
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
  
 0.715
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
 
 
   0.637
Maqu_1149
KEGG: hch:HCH_04750 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.497
Maqu_2988
PFAM: NERD domain protein; DNA topoisomerase, type IA, zn finger domain protein; KEGG: sat:SYN_02043 hypothetical membrane protein.
  
    0.446
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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