Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Maqu_1723 | Maqu_1724 | Plasmid and phage iteron-binding protein; PFAM: replication C family protein; KEGG: sty:HCM1.221 putative replication protein. | Plasmid and phage replicative helicase; KEGG: net:Neut_2254 putative DNA helicase. | 0.793 |
Maqu_1723 | Maqu_1725 | Plasmid and phage iteron-binding protein; PFAM: replication C family protein; KEGG: sty:HCM1.221 putative replication protein. | Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: net:Neut_2253 phage transcriptional regulator, AlpA. | 0.786 |
Maqu_1723 | Maqu_1726 | Plasmid and phage iteron-binding protein; PFAM: replication C family protein; KEGG: sty:HCM1.221 putative replication protein. | PFAM: phage integrase family protein; KEGG: pau:PA14_15350 putative integrase; Belongs to the 'phage' integrase family. | 0.444 |
Maqu_1724 | Maqu_1723 | Plasmid and phage replicative helicase; KEGG: net:Neut_2254 putative DNA helicase. | Plasmid and phage iteron-binding protein; PFAM: replication C family protein; KEGG: sty:HCM1.221 putative replication protein. | 0.793 |
Maqu_1724 | Maqu_1725 | Plasmid and phage replicative helicase; KEGG: net:Neut_2254 putative DNA helicase. | Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: net:Neut_2253 phage transcriptional regulator, AlpA. | 0.781 |
Maqu_1724 | Maqu_1726 | Plasmid and phage replicative helicase; KEGG: net:Neut_2254 putative DNA helicase. | PFAM: phage integrase family protein; KEGG: pau:PA14_15350 putative integrase; Belongs to the 'phage' integrase family. | 0.793 |
Maqu_1725 | Maqu_1723 | Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: net:Neut_2253 phage transcriptional regulator, AlpA. | Plasmid and phage iteron-binding protein; PFAM: replication C family protein; KEGG: sty:HCM1.221 putative replication protein. | 0.786 |
Maqu_1725 | Maqu_1724 | Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: net:Neut_2253 phage transcriptional regulator, AlpA. | Plasmid and phage replicative helicase; KEGG: net:Neut_2254 putative DNA helicase. | 0.781 |
Maqu_1725 | Maqu_1726 | Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: net:Neut_2253 phage transcriptional regulator, AlpA. | PFAM: phage integrase family protein; KEGG: pau:PA14_15350 putative integrase; Belongs to the 'phage' integrase family. | 0.447 |
Maqu_1726 | Maqu_1723 | PFAM: phage integrase family protein; KEGG: pau:PA14_15350 putative integrase; Belongs to the 'phage' integrase family. | Plasmid and phage iteron-binding protein; PFAM: replication C family protein; KEGG: sty:HCM1.221 putative replication protein. | 0.444 |
Maqu_1726 | Maqu_1724 | PFAM: phage integrase family protein; KEGG: pau:PA14_15350 putative integrase; Belongs to the 'phage' integrase family. | Plasmid and phage replicative helicase; KEGG: net:Neut_2254 putative DNA helicase. | 0.793 |
Maqu_1726 | Maqu_1725 | PFAM: phage integrase family protein; KEGG: pau:PA14_15350 putative integrase; Belongs to the 'phage' integrase family. | Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: net:Neut_2253 phage transcriptional regulator, AlpA. | 0.447 |