STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_1822KEGG: hch:HCH_02593 hypothetical protein. (408 aa)    
Predicted Functional Partners:
Maqu_1823
KEGG: hch:HCH_02592 hypothetical protein.
       0.799
Maqu_1824
KEGG: hch:HCH_02591 hypothetical protein.
       0.776
Maqu_1821
KEGG: hch:HCH_02594 hypothetical protein.
       0.550
Maqu_1819
KEGG: hch:HCH_02596 hypothetical protein.
       0.544
Maqu_1820
PFAM: protein of unknown function DUF1058; KEGG: hch:HCH_02595 hypothetical protein.
       0.540
Maqu_1816
KEGG: hch:HCH_02599 hypothetical protein.
       0.516
Maqu_1818
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: hch:HCH_02597 thiol-disulfide isomerase and thioredoxins.
       0.516
Maqu_1817
KEGG: hch:HCH_02598 hypothetical protein.
       0.510
Maqu_1815
KEGG: hch:HCH_02600 hypothetical protein.
       0.490
Maqu_1814
KEGG: hch:HCH_02601 protein containing tetratricopeptide repeats.
       0.477
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.