STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_1881PFAM: type IV pilus assembly PilZ; KEGG: hch:HCH_02127 hypothetical protein. (96 aa)    
Predicted Functional Partners:
Maqu_1880
PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; KEGG: hch:HCH_02128 SH3 domain protein.
       0.773
Maqu_1967
PFAM: CheW domain protein; KEGG: hch:HCH_05162 protein containing CheW-like domain.
  
     0.767
Maqu_0837
Type IV pilus assembly PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein.
  
  
 0.759
Maqu_1358
PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_03926 histone acetyltransferase HPA2/related acetyltransferase.
  
     0.745
Maqu_2488
KEGG: hch:HCH_02187 hypothetical protein.
  
     0.724
Maqu_1973
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
     0.717
Maqu_2268
PFAM: HDOD; KEGG: hch:HCH_01785 predicted signal transduction protein.
  
     0.714
Maqu_0897
PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: hch:HCH_04305 FOG: CheY-like receiver.
 
     0.709
Maqu_0896
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: hch:HCH_04306 signal transduction histidine kinase.
  
     0.676
Maqu_1440
KEGG: cvi:CV1119 hypothetical protein.
  
     0.667
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.