STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_2000PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: hch:HCH_05197 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. (411 aa)    
Predicted Functional Partners:
Maqu_1999
Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: hch:HCH_05196 sigma 54-dependent transcriptional activator containing CheY-like receiver domain.
 0.994
fliE
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: hch:HCH_05195 flagellar hook-basal body complex protein (FliE).
 
 
 0.923
Maqu_1997
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.883
Maqu_1991
PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: hch:HCH_05185 response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
 
 0.838
Maqu_1977
PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase; KEGG: hch:HCH_05173 flagellar GTP-binding protein.
 
  
 0.822
Maqu_3598
PFAM: response regulator receiver; KEGG: hch:HCH_00769 FOG: CheY-like receiver.
  
 
 
 0.809
Maqu_1176
Putative CheW protein; PFAM: response regulator receiver; CheW domain protein; KEGG: hch:HCH_04719 chemotaxis signal transduction protein.
 
   
 0.774
Maqu_1967
PFAM: CheW domain protein; KEGG: hch:HCH_05162 protein containing CheW-like domain.
 
  
 0.758
Maqu_1110
KEGG: hch:HCH_04474 muramidase (flagellum-specific); TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2.
 
    0.738
Maqu_1989
PFAM: flagellar hook-length control protein; KEGG: hch:HCH_05183 flagellar hook-length control protein.
 
  
 0.737
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.