STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_2192TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: hch:HCH_01398 outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid. (725 aa)    
Predicted Functional Partners:
Maqu_0183
Outer membrane transport energization protein TonB; TIGRFAM: TonB family protein; KEGG: aeh:Mlg_1845 TonB family protein; TC 2.C.1.1.1.
  
 
 0.591
Maqu_2193
PFAM: glucose sorbosone dehydrogenase; KEGG: cyb:CYB_1374 glucose/sorbosone dehydrogenase family protein.
 
     0.570
Maqu_1362
PFAM: TonB-dependent receptor, plug; KEGG: hch:HCH_03922 outer membrane receptor protein, mostly Fe transport.
  
  
 0.569
Maqu_1700
Cell division and transport-associated protein TolA; TIGRFAM: TonB family protein; PFAM: TolA family protein; KEGG: hch:HCH_04916 TolA family protein; TC 2.C.1.2.1.
  
 
 0.545
Maqu_3765
TIGRFAM: TonB family protein; KEGG: hch:HCH_00548 periplasmic protein TonB, links inner and outer membranes.
  
 
 0.545
Maqu_3294
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: plu:plu2850 unnamed protein product; similar to outer membrane protein precursor.
  
  
0.543
Maqu_1595
Outer membrane transport energization protein TonB; KEGG: hch:HCH_02634 hypothetical protein; TC 2.C.1.1.1.
  
 
 0.480
Maqu_1807
Outer membrane transport energization protein TonB; KEGG: hch:HCH_02634 hypothetical protein; TC 2.C.1.1.1.
  
 
 0.480
Maqu_3532
TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pat:Patl_3414 TonB-dependent receptor.
 
  
 0.457
Maqu_1341
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: eba:ebA1847 probable outer membrane protein.
  
  
 0.420
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.