STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_2208Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: sdn:Sden_0914 EAL domain protein. (254 aa)    
Predicted Functional Partners:
Maqu_2914
Diguanylate cyclase with PAS/PAC sensor; KEGG: bbr:BB2790 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein.
 
 0.953
Maqu_1163
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pfl:PFL_4320 GGDEF domain protein.
  
 0.900
Maqu_0096
Diguanylate cyclase with PAS/PAC sensor; KEGG: eba:ebA864 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein.
 
 0.890
Maqu_1806
KEGG: aeh:Mlg_2675 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 0.857
Maqu_2607
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: sde:Sde_0392 response regulator receiver domain protein (CheY-like).
 
  
 0.854
Maqu_0331
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: shm:Shewmr7_2298 diguanylate cyclase.
 
  
 0.842
Maqu_0159
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pat:Patl_1920 diguanylate cyclase.
 
    0.841
Maqu_0259
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pha:PSHAa2463 hypothetical protein.
 
  
 0.830
Maqu_2517
KEGG: noc:Noc_1609 multisensor diguanylate cyclase/phophodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 0.823
Maqu_3846
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: vvu:VV21595 sensor histidine kinase.
  
 0.815
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.