STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_2295PFAM: major facilitator superfamily MFS_1; KEGG: rpd:RPD_4124 major facilitator superfamily MFS_1. (402 aa)    
Predicted Functional Partners:
Maqu_2297
PFAM: beta-lactamase domain protein; KEGG: tbd:Tbd_2288 phosphonate metabolism protein, PhnP.
  
    0.783
Maqu_2294
Phosphonate C-P lyase system protein PhnL; KEGG: tbd:Tbd_2291 ABC phosphonate transport system ATPase; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.777
phnN-2
Phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
       0.777
Maqu_2288
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ana:all2221 phosphonate metabolism protein.
       0.757
Maqu_2290
PFAM: phosphonate metabolism; KEGG: tbd:Tbd_2295 putative PhnH protein, phosphonate metabolism, function unknown.
       0.749
Maqu_2291
PFAM: phosphonate metabolism; KEGG: tbd:Tbd_2294 phosphonate metabolism protein.
       0.749
Maqu_2292
Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
       0.749
Maqu_2289
KEGG: tbd:Tbd_2296 putative phosphonate metabolism protein PhnG; K06166 PhnG protein.
       0.746
Maqu_2293
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tbd:Tbd_2292 ABC phosphonate transport system ATPase.
       0.746
phnC-3
ABC transporter related protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
       0.721
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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