STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_2815PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: csa:Csal_0543 fumarylacetoacetate (FAA) hydrolase. (220 aa)    
Predicted Functional Partners:
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
       0.766
Maqu_2813
PFAM: Xanthine/uracil/vitamin C permease; KEGG: pau:PA14_62440 putative transporter.
       0.643
Maqu_2802
PFAM: protein of unknown function DUF1446; KEGG: hch:HCH_05745 predicted ATPase.
  
  
 0.607
Maqu_2816
PFAM: ABC-1 domain protein; KEGG: hch:HCH_01665 predicted unusual protein kinase.
       0.590
gshA
TIGRFAM: glutamate--cysteine ligase; KEGG: hch:HCH_06422 glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
   
    0.582
Maqu_0371
PFAM: nitroreductase; KEGG: csa:Csal_0202 nitroreductase; Belongs to the flavin oxidoreductase frp family.
 
  
 0.554
Maqu_0483
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: hch:HCH_00287 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase.
  
  
 0.512
Maqu_1608
PFAM: protein of unknown function UPF0153; KEGG: sde:Sde_1340 hypothetical protein; Belongs to the UPF0260 family.
      0.511
Maqu_1023
TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: csa:Csal_2166 chorismate mutase.
     
 0.510
Maqu_2812
PFAM: protein of unknown function UPF0126; KEGG: bte:BTH_I1558 YadS protein.
       0.483
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.