STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_3105PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: hne:HNE_3082 deoxyribodipyrimidine photolyase family protein. (505 aa)    
Predicted Functional Partners:
ung
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
 
      0.882
Maqu_3104
KEGG: sfr:Sfri_0778 hypothetical protein.
 
     0.851
Maqu_3010
PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: abo:ABO_0764 hypothetical protein.
  
  
 0.837
Maqu_3101
PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: pen:PSEEN2739 photolyase.
 
   
 0.773
Maqu_2878
PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: pat:Patl_2995 Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
      
 0.744
Maqu_0316
KEGG: ilo:IL2050 hypothetical protein.
 
     0.675
Maqu_2197
PFAM: beta-Ig-H3/fasciclin; KEGG: cps:CPS_1375 putative adhesion lipoprotein.
 
  
 0.581
Maqu_3103
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: abo:ABO_0119 haloacid dehalogenase-like hydrolase, putative.
       0.555
Maqu_1369
KEGG: tcx:Tcr_0854 hypothetical protein; Belongs to the UPF0753 family.
  
     0.508
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.