STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_3136PFAM: NnrS family protein; KEGG: net:Neut_0425 NnrS family protein. (375 aa)    
Predicted Functional Partners:
Maqu_3137
KEGG: aeh:Mlg_1004 nitrate/nitrite antiporter.
 
     0.587
Maqu_3079
PFAM: FMN-binding domain protein; KEGG: pau:PA14_20230 NosR regulatory protein for N2O reductase.
 
    0.532
Maqu_3114
PFAM: cytochrome c, class I; KEGG: cps:CPS_0600 nitric-oxide reductase, C subunit.
 
    0.510
Maqu_3115
PFAM: cytochrome c oxidase, subunit I; KEGG: hch:HCH_04410 nitric oxide reductase large subunit; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.507
Maqu_3135
TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: abo:ABO_2634 membrane protein, hemolysin III homolog, putative.
       0.503
Maqu_3117
PFAM: von Willebrand factor, type A; KEGG: tbd:Tbd_0555 putative nitric oxide reductase activation protein.
 
    0.474
nosZ
Nitrous oxide reductase apoprotein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
 
   
 0.427
Maqu_0016
KEGG: pau:PA14_12550 hypothetical protein.
  
  
 0.401
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.