STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_3276PFAM: Bile acid:sodium symporter; KEGG: gox:GOX0688 putative efflux protein. (336 aa)    
Predicted Functional Partners:
glk
Glucokinase; KEGG: hch:HCH_00434 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family.
      
 0.731
Maqu_3275
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sil:SPO1387 cation efflux system protein.
       0.701
Maqu_3277
PFAM: DSBA oxidoreductase; KEGG: net:Neut_0081 DsbA oxidoreductase.
       0.628
Maqu_3278
Membrane protein; KEGG: hch:HCH_04018 predicted membrane protein.
       0.582
Maqu_3279
PFAM: electron transport protein SCO1/SenC; KEGG: hch:HCH_04019 uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
       0.582
Maqu_1737
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pau:PA14_25540 phosphotyrosine protein phosphatase.
  
  
 0.512
Maqu_3273
KEGG: bxe:Bxe_C0883 heavy metal/H+ antiporter, CDF family.
       0.487
lspA-5
Signal peptidase II, Aspartic peptidase, MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.479
Maqu_3041
Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; Methyltransferase type 11; Methyltransferase type 12; KEGG: hch:HCH_01534 SAM-dependent methyltransferase.
  
  
 0.442
Maqu_1961
KEGG: pfo:Pfl_1576 hypothetical protein.
  
     0.402
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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