STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_3279PFAM: electron transport protein SCO1/SenC; KEGG: hch:HCH_04019 uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. (211 aa)    
Predicted Functional Partners:
Maqu_3278
Membrane protein; KEGG: hch:HCH_04018 predicted membrane protein.
 
   
 0.906
Maqu_0062
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.896
Maqu_3826
PFAM: Redoxin domain protein; KEGG: pau:PA14_32600 probable thiol:disulfide interchange protein.
 
 
 0.772
Maqu_3277
PFAM: DSBA oxidoreductase; KEGG: net:Neut_0081 DsbA oxidoreductase.
  
  
 0.727
Maqu_0069
PFAM: cytochrome oxidase assembly; KEGG: pfl:PFL_0068 cytochrome oxidase assembly protein.
 
 
 0.669
Maqu_2470
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
   
 0.646
Maqu_2181
PFAM: protein of unknown function DUF461; KEGG: nha:Nham_2200 protein of unknown function DUF461.
 
   
 0.633
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
 0.631
Maqu_0064
PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: ilo:IL0258 cytochrome c oxidase assembly protein.
 
 
 0.587
Maqu_3276
PFAM: Bile acid:sodium symporter; KEGG: gox:GOX0688 putative efflux protein.
       0.582
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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