STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_3295Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: csa:Csal_2679 transcriptional regulator, LysR family. (317 aa)    
Predicted Functional Partners:
Maqu_2886
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: csa:Csal_0148 transcriptional regulator, LysR family.
  
     0.708
Maqu_3189
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: csa:Csal_0148 transcriptional regulator, LysR family.
  
     0.677
Maqu_3296
PFAM: periplasmic binding protein; KEGG: csa:Csal_2699 periplasmic binding protein.
 
     0.672
Maqu_3297
PFAM: transport system permease protein; KEGG: csa:Csal_2700 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.602
Maqu_1566
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pfl:PFL_2062 transcriptional regulator, LysR family.
  
     0.596
Maqu_1282
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ana:all8086 transcriptional regulator.
  
     0.592
Maqu_3238
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ana:all8086 transcriptional regulator.
  
     0.592
Maqu_3298
PFAM: transport system permease protein; KEGG: csa:Csal_2701 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.592
Maqu_3299
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csa:Csal_2702 ABC transporter related.
 
    0.591
Maqu_0336
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppr:PBPRA1296 hypothetical transcriptional regulator.
  
     0.576
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.