STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_3465PFAM: isocitrate lyase and phosphorylmutase; KEGG: abo:ABO_2741 isocitrate lyase. (530 aa)    
Predicted Functional Partners:
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
 
 0.998
Maqu_3674
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
 
 0.916
Maqu_1859
Aconitase; PFAM: aconitate hydratase domain protein; aconitate hydratase 2; KEGG: sde:Sde_1893 transcriptional regulator, XRE family; Belongs to the aconitase/IPM isomerase family.
     
 0.911
Maqu_3302
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: par:Psyc_1652 glycolate oxidase iron-sulfur subunit.
     
 0.909
Maqu_1832
KEGG: hch:HCH_00349 2-keto-3-deoxy-6-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
     
 0.907
Maqu_3054
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: hch:HCH_01519 lactate dehydrogenase and related dehydrogenase.
     
 0.906
Maqu_3303
PFAM: FAD linked oxidase domain protein; KEGG: par:Psyc_1651 glycolate oxidase subunit GlcE.
     
 0.904
Maqu_3304
PFAM: FAD linked oxidase domain protein; KEGG: par:Psyc_1650 glycolate oxidase subunit D.
     
 0.904
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
  
 0.836
Maqu_1132
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  
 0.790
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.