STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_3581PFAM: regulatory protein, TetR; KEGG: hch:HCH_00999 transcriptional regulator. (209 aa)    
Predicted Functional Partners:
Maqu_3582
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: ilo:IL1542 acyl-CoA dehydrogenase.
    0.869
Maqu_3579
KEGG: hch:HCH_01001 hypothetical protein.
       0.570
Maqu_3580
Hypothetical protein.
       0.570
Maqu_3583
KEGG: pcr:Pcryo_1963 protein of unknown function DUF503.
       0.448
Maqu_3584
PFAM: Pyridoxal-dependent decarboxylase; KEGG: hch:HCH_00996 glutamate decarboxylase and related PLP-dependent protein.
       0.403
Maqu_3820
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: pau:PA14_44540 hypothetical protein.
  
     0.403
Maqu_3819
KEGG: rme:Rmet_3598 flavin-containing monooxygenase FMO.
  
     0.402
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.