STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_3733PFAM: Uncharacterised conserved protein UCP028301; KEGG: vch:VCA0107 hypothetical protein. (165 aa)    
Predicted Functional Partners:
Maqu_3732
PFAM: protein of unknown function DUF877; KEGG: vch:VCA0108 hypothetical protein.
 
 
 0.998
Maqu_3726
PFAM: protein of unknown function DUF876; KEGG: vch:VCA0114 hypothetical protein.
 
  
 0.976
Maqu_0180
PFAM: protein of unknown function DUF796; KEGG: eca:ECA2866 hypothetical protein.
 
 
 0.972
Maqu_3725
KEGG: aeh:Mlg_0053 hypothetical protein.
 
  
 0.963
Maqu_3730
PFAM: protein of unknown function DUF879; KEGG: vch:VCA0110 hypothetical protein.
 
  
 0.955
Maqu_3729
PFAM: protein of unknown function DUF1305; KEGG: aeh:Mlg_0049 protein of unknown function DUF1305.
 
  
 0.954
Maqu_3727
KEGG: plu:plu0366 hypothetical protein.
 
  
 0.953
Maqu_3721
PFAM: ImpA domain protein; KEGG: aeh:Mlg_0056 ImpA domain protein.
 
  
 0.934
Maqu_3731
PFAM: protein of unknown function DUF1316; KEGG: aeh:Mlg_0047 protein of unknown function DUF1316.
  
  
 0.918
Maqu_3728
FHA domain containing protein; KEGG: eca:ECA3440 hypothetical protein.
 
  
 0.908
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.