STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
betITranscriptional regulator, TetR family; Repressor involved in choline regulation of the bet genes. (197 aa)    
Predicted Functional Partners:
Maqu_3841
Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
  
 0.910
betA
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
  
 0.896
Maqu_2969
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: hch:HCH_00852 ABC-type proline/glycine betaine transport system, periplasmic components.
 
     0.731
Maqu_3839
KEGG: sfr:Sfri_1945 putative transporter, BCCT family protein.
 
  
 0.676
Maqu_2133
TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: ilo:IL0870 methylmalonate-semialdehyde dehydrogenase.
 
  
 0.618
Maqu_0437
PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: abo:ABO_2710 alcohol dehydrogenase.
 
  
 0.615
Maqu_0606
PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: abo:ABO_2710 alcohol dehydrogenase.
 
  
 0.614
Maqu_3843
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gme:Gmet_3284 enoyl-CoA hydratase/isomerase.
       0.496
Maqu_3410
PFAM: aldehyde dehydrogenase; KEGG: hch:HCH_01852 NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.472
astD
Aldehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
 
  
 0.462
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.