STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gura_0383PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Fibronectin, type III domain protein; Cna B domain protein; APHP domain protein; SMART: Immunoglobulin subtype. (1726 aa)    
Predicted Functional Partners:
Gura_0490
Hypothetical protein.
 
 
 
 0.870
Gura_3315
PFAM: protein phosphatase 2C domain protein.
  
 
 0.716
Gura_3098
PFAM: beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR.
  
  
 0.577
Gura_0985
PFAM: Hpt domain protein.
   
 
 0.574
Gura_1166
PFAM: DivIVA family protein.
  
 
 0.541
Gura_1671
Capsular polysaccharide biosynthesis protein-like protein.
  
 
 
 0.528
Gura_1756
TIGRFAM: metal dependent phophohydrolase; PFAM: GAF domain protein; histidine kinase, HAMP region domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region.
   
 
 0.489
Gura_2043
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region, ATPase domain protein.
    
 
 0.477
Gura_1549
PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 
 0.470
Gura_1112
SMART: LamG domain protein jellyroll fold domain protein.
 
  
 0.453
Your Current Organism:
Geobacter uraniireducens
NCBI taxonomy Id: 351605
Other names: G. uraniireducens Rf4, Geobacter uraniireducens Rf4, Geobacter uraniireducens str. Rf4, Geobacter uraniireducens strain Rf4, Geobacter uraniumreducens JCM 13001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.