STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gura_1244PFAM: ABC transporter related; SMART: AAA ATPase. (252 aa)    
Predicted Functional Partners:
Gura_1245
PFAM: protein of unknown function DUF140.
 0.992
Gura_1243
PFAM: Mammalian cell entry related domain protein.
 
 0.989
Gura_1039
PFAM: protein of unknown function DUF140.
 0.986
Gura_3706
PFAM: protein of unknown function DUF140.
 0.985
Gura_1896
PFAM: protein of unknown function DUF140.
 
 0.983
Gura_2637
PFAM: protein of unknown function DUF140.
 
 0.972
Gura_1041
PFAM: Mammalian cell entry related domain protein.
 
 0.965
Gura_3705
PFAM: Mammalian cell entry related domain protein.
 
 0.944
Gura_1894
PFAM: Mammalian cell entry related domain protein.
 
 0.941
Gura_1043
PFAM: toluene tolerance family protein.
  
 
 0.859
Your Current Organism:
Geobacter uraniireducens
NCBI taxonomy Id: 351605
Other names: G. uraniireducens Rf4, Geobacter uraniireducens Rf4, Geobacter uraniireducens str. Rf4, Geobacter uraniireducens strain Rf4, Geobacter uraniumreducens JCM 13001
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.