Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Gura_1249 | Gura_1424 | Transcriptional regulator, CopG family. | PFAM: plasmid stabilization system. | 0.720 |
Gura_1249 | Gura_1487 | Transcriptional regulator, CopG family. | PFAM: plasmid stabilization system. | 0.724 |
Gura_1262 | Gura_1319 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.563 |
Gura_1262 | Gura_1423 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.690 |
Gura_1262 | Gura_1424 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | PFAM: plasmid stabilization system. | 0.650 |
Gura_1262 | Gura_1487 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | PFAM: plasmid stabilization system. | 0.762 |
Gura_1319 | Gura_1262 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.563 |
Gura_1319 | Gura_1424 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | PFAM: plasmid stabilization system. | 0.755 |
Gura_1319 | Gura_1487 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | PFAM: plasmid stabilization system. | 0.641 |
Gura_1319 | Gura_1488 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.680 |
Gura_1319 | Gura_3207 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Hypothetical protein. | 0.566 |
Gura_1423 | Gura_1262 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.690 |
Gura_1423 | Gura_1424 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | PFAM: plasmid stabilization system. | 0.947 |
Gura_1423 | Gura_1487 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | PFAM: plasmid stabilization system. | 0.574 |
Gura_1423 | Gura_1488 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.716 |
Gura_1423 | Gura_3207 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Hypothetical protein. | 0.579 |
Gura_1424 | Gura_1249 | PFAM: plasmid stabilization system. | Transcriptional regulator, CopG family. | 0.720 |
Gura_1424 | Gura_1262 | PFAM: plasmid stabilization system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.650 |
Gura_1424 | Gura_1319 | PFAM: plasmid stabilization system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.755 |
Gura_1424 | Gura_1423 | PFAM: plasmid stabilization system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.947 |
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