STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gura_1808Hypothetical protein. (207 aa)    
Predicted Functional Partners:
Gura_1807
Hypothetical protein.
  
  
 0.772
Gura_1804
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein.
  
    0.734
Gura_1805
Hypothetical protein.
  
  
 0.606
Gura_1806
Hypothetical protein.
     
 0.601
Gura_1811
PFAM: Fimbrial assembly family protein.
     
 0.486
Gura_1812
PFAM: Pilus assembly protein, PilO.
     
 0.445
Gura_1813
Hypothetical protein.
     
 0.445
Gura_1810
TIGRFAM: type IV pilus assembly protein PilM.
     
 0.422
Gura_1803
Hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
       0.402
Gura_1809
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein.
       0.401
Your Current Organism:
Geobacter uraniireducens
NCBI taxonomy Id: 351605
Other names: G. uraniireducens Rf4, Geobacter uraniireducens Rf4, Geobacter uraniireducens str. Rf4, Geobacter uraniireducens strain Rf4, Geobacter uraniumreducens JCM 13001
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