Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gura_0501 | Gura_2764 | Gura_0501 | Gura_2764 | Hypothetical protein. | Hypothetical protein. | 0.699 |
Gura_0501 | alaS | Gura_0501 | Gura_0222 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.919 |
Gura_0501 | rpoA | Gura_0501 | Gura_1092 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.716 |
Gura_0501 | rpoB | Gura_0501 | Gura_1061 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.712 |
Gura_0501 | rpoZ | Gura_0501 | Gura_3161 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.681 |
Gura_1473 | Gura_2764 | Gura_1473 | Gura_2764 | Hypothetical protein. | Hypothetical protein. | 0.699 |
Gura_1473 | alaS | Gura_1473 | Gura_0222 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.919 |
Gura_1473 | rpoA | Gura_1473 | Gura_1092 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.716 |
Gura_1473 | rpoB | Gura_1473 | Gura_1061 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.712 |
Gura_1473 | rpoZ | Gura_1473 | Gura_3161 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.681 |
Gura_1629 | Gura_2764 | Gura_1629 | Gura_2764 | Hypothetical protein. | Hypothetical protein. | 0.699 |
Gura_1629 | alaS | Gura_1629 | Gura_0222 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.919 |
Gura_1629 | rpoA | Gura_1629 | Gura_1092 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.716 |
Gura_1629 | rpoB | Gura_1629 | Gura_1061 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.712 |
Gura_1629 | rpoZ | Gura_1629 | Gura_3161 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.681 |
Gura_2763 | Gura_2764 | Gura_2763 | Gura_2764 | ABC-type phosphate/phosphonate transport system periplasmic component-like protein. | Hypothetical protein. | 0.823 |
Gura_2763 | Gura_2765 | Gura_2763 | Gura_2765 | ABC-type phosphate/phosphonate transport system periplasmic component-like protein. | Hypothetical protein. | 0.884 |
Gura_2764 | Gura_0501 | Gura_2764 | Gura_0501 | Hypothetical protein. | Hypothetical protein. | 0.699 |
Gura_2764 | Gura_1473 | Gura_2764 | Gura_1473 | Hypothetical protein. | Hypothetical protein. | 0.699 |
Gura_2764 | Gura_1629 | Gura_2764 | Gura_1629 | Hypothetical protein. | Hypothetical protein. | 0.699 |
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