STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gura_3413Hypothetical protein. (285 aa)    
Predicted Functional Partners:
Gura_2019
PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type.
 
    0.852
Gura_3414
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein.
 
     0.803
Gura_3412
PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type.
  
    0.798
Gura_3415
Two component, sigma-54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
       0.709
Gura_0493
Hypothetical protein.
  
     0.666
Gura_2155
PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
  
     0.661
Gura_0204
Cell division and transport-associated protein TolA; TIGRFAM: TonB family protein; TC 2.C.1.2.1.
  
     0.655
Gura_1309
Hypothetical protein.
  
     0.645
Gura_3048
PFAM: multicopper oxidase, type 2; FG-GAP repeat protein.
 
     0.635
Gura_2187
Hypothetical protein.
  
     0.630
Your Current Organism:
Geobacter uraniireducens
NCBI taxonomy Id: 351605
Other names: G. uraniireducens Rf4, Geobacter uraniireducens Rf4, Geobacter uraniireducens str. Rf4, Geobacter uraniireducens strain Rf4, Geobacter uraniumreducens JCM 13001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.