STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gura_4138PFAM: DNA repair protein RadC; Belongs to the UPF0758 family. (228 aa)    
Predicted Functional Partners:
Gura_3686
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
  
 0.882
Gura_2860
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.852
Gura_4125
Amidophosphoribosyltransferase-like protein.
 
    0.845
Gura_1567
PFAM: glycosyl transferase, family 2.
  
    0.767
uppP-2
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
 
     0.706
Gura_1885
TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein.
 
  
 0.698
Gura_3690
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein.
  
  
 0.660
Gura_0217
TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; Belongs to the CinA family.
     
 0.594
Gura_0985
PFAM: Hpt domain protein.
  
    0.542
Gura_0744
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein; Diverse 7TM receptor, transmembrane region; histidine kinase, dimerisation and phosphoacceptor region.
 
    0.534
Your Current Organism:
Geobacter uraniireducens
NCBI taxonomy Id: 351605
Other names: G. uraniireducens Rf4, Geobacter uraniireducens Rf4, Geobacter uraniireducens str. Rf4, Geobacter uraniireducens strain Rf4, Geobacter uraniumreducens JCM 13001
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.