STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gura_4221TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein. (359 aa)    
Predicted Functional Partners:
Gura_4030
PFAM: response regulator receiver; histidine kinase A domain protein.
 
 0.929
Gura_1572
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein.
 
 0.873
Gura_4220
PFAM: response regulator receiver.
 
 
 
 0.873
Gura_1548
PFAM: response regulator receiver.
 
 
   0.855
Gura_3143
PFAM: response regulator receiver.
 
 0.855
Gura_2299
PFAM: response regulator receiver; General secretory system II, protein E domain protein.
 
 
 0.852
Gura_0978
PFAM: response regulator receiver; General secretory system II, protein E domain protein.
 
 
 0.849
Gura_1798
PFAM: response regulator receiver.
 
 
 0.849
Gura_3136
PFAM: response regulator receiver.
 
 
 0.849
Gura_3147
PFAM: response regulator receiver.
 
 
 0.848
Your Current Organism:
Geobacter uraniireducens
NCBI taxonomy Id: 351605
Other names: G. uraniireducens Rf4, Geobacter uraniireducens Rf4, Geobacter uraniireducens str. Rf4, Geobacter uraniireducens strain Rf4, Geobacter uraniumreducens JCM 13001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.