STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0013PFAM: Rhomboid family protein; KEGG: mtc:MT0119 rhomboid family protein. (287 aa)    
Predicted Functional Partners:
Acel_0012
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.810
Acel_1156
PFAM: band 7 protein; KEGG: fra:Francci3_1352 band 7 protein.
   
 0.754
Acel_2150
PFAM: Peptidoglycan-binding domain 1 protein; cell wall hydrolase/autolysin; KEGG: fra:Francci3_4538 cell wall hydrolase/autolysin.
  
   0.610
Acel_0164
PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: tfu:Tfu_0372 hypothetical protein.
  
    0.532
Acel_0011
Hypothetical protein.
       0.529
Acel_0601
PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: fra:Francci3_3829 twin-arginine translocation protein TatB.
   
 
 0.522
tatA
Sec-independent translocation protein mttA/Hcf106; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.522
Acel_0827
PFAM: Rhomboid family protein; KEGG: sma:SAV2227 hypothetical protein.
  
   
0.496
Acel_1389
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sma:SAV3319 subtilisin-like protease.
 
  
 0.451
Acel_1904
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: oih:OB2375 intracellular alkaline serine proteinase.
  
  
 0.432
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.