STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0015PFAM: protein of unknown function DUF881; KEGG: pac:PPA0183 membrane spanning protein DUF881. (263 aa)    
Predicted Functional Partners:
Acel_1229
PFAM: protein of unknown function DUF1290; KEGG: sco:SCO1386 integral membrane protein.
 
    0.851
Acel_0016
TIGRFAM: sortase family protein; PFAM: peptidase C60, sortase A and B; KEGG: blo:BL0591 hypothetical transmembrane protein with unknown function.
       0.810
Acel_0017
KEGG: sco:SCO3852 hypothetical protein.
       0.810
Acel_0018
Anthranilate synthase, component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: sco:SCO3851 putative glutamine amidotransferase.
       0.636
crgA
Conserved hypothetical protein; Involved in cell division; Belongs to the CrgA family.
       0.623
Acel_0155
KEGG: fra:Francci3_0065 hypothetical protein.
  
     0.572
Acel_0177
G5 domain protein; PFAM: protein of unknown function DUF348; Transglycosylase domain protein; G5 domain protein; KEGG: sco:SCO3150 hypothetical protein.
  
     0.562
Acel_0391
PFAM: 2',5' RNA ligase; KEGG: fra:Francci3_0662 2',5' RNA ligase.
  
     0.462
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.