STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0016TIGRFAM: sortase family protein; PFAM: peptidase C60, sortase A and B; KEGG: blo:BL0591 hypothetical transmembrane protein with unknown function. (249 aa)    
Predicted Functional Partners:
Acel_0017
KEGG: sco:SCO3852 hypothetical protein.
 
   
 0.869
Acel_0015
PFAM: protein of unknown function DUF881; KEGG: pac:PPA0183 membrane spanning protein DUF881.
       0.817
Acel_0018
Anthranilate synthase, component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: sco:SCO3851 putative glutamine amidotransferase.
       0.644
crgA
Conserved hypothetical protein; Involved in cell division; Belongs to the CrgA family.
       0.631
Acel_0458
PFAM: major facilitator superfamily MFS_1; KEGG: lxx:Lxx17780 ABC transporter, permease protein.
  
     0.512
Acel_1332
KEGG: fra:Francci3_3216 hypothetical protein.
  
     0.424
Acel_0177
G5 domain protein; PFAM: protein of unknown function DUF348; Transglycosylase domain protein; G5 domain protein; KEGG: sco:SCO3150 hypothetical protein.
  
     0.417
Acel_2158
PFAM: 60 kDa inner membrane insertion protein; KEGG: tfu:Tfu_3114 putative membrane protein.
 
   
 0.400
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.