STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0051ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. (255 aa)    
Predicted Functional Partners:
Acel_0050
PFAM: FMN-binding domain protein; KEGG: sma:SAV6771 hypothetical protein.
 
  
 0.960
Acel_0049
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: sma:SAV6772 oxidoreductase.
 
     0.950
Acel_0904
KEGG: fra:Francci3_2206 hypothetical protein.
  
     0.624
Acel_0048
D-mannonate dehydratase; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: ccr:CC2812 mandelate racemase / muconate lactonizing enzyme family.
       0.489
Acel_2066
PFAM: Vitamin K epoxide reductase; KEGG: sai:Saci_1138 conserved crenarchaeal membrane protein.
  
     0.449
Acel_1360
PFAM: extracellular solute-binding protein, family 1; KEGG: ret:RHE_PB00115 putative sugar ABC transporter, substrate-binding protein; TC 3.A.1.1.-.
  
     0.422
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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