STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0056PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sma:SAV4009 magnesium or manganese-dependent protein phosphatase. (418 aa)    
Predicted Functional Partners:
Acel_0055
KEGG: fra:Francci3_4326 hypothetical protein.
 
     0.840
Acel_0053
PFAM: Mg2+ transporter protein, CorA family protein; KEGG: pac:PPA1716 putative magnesium transport protein.
 
    0.806
Acel_1833
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dvu:DVU1449 anti-anti-sigma factor, putative; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.803
Acel_1975
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: fra:Francci3_4302 anti-sigma-factor antagonist (STAS) domain protein.
 
 
 0.774
Acel_0054
KEGG: fra:Francci3_4327 hypothetical protein.
       0.773
Acel_0565
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sco:SCO5244 anti-sigma factor.
 
 
 0.716
Acel_1974
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sma:SAV4615 anti-sigma factor.
 
 
 0.682
Acel_1150
PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
  
 
 0.672
Acel_1420
TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; KEGG: bja:bll0955 hypothetical protein.
  
  
 0.655
Acel_0842
PFAM: flagellar motor switch protein FliG; KEGG: bga:BG0293 flagellar motor switch protein.
  
    0.595
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.